Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814307.1_cds_XP_016497871.1_11958
CDS Infomation

[gene=LOC107816650] [db_xref=GeneID:107816650] [protein=IQ domain-containing protein IQM3-like isoform X2] [protein_id=XP_016497871.1] [location=complement(join(450..953,1520..1621,2063..2155,2264..2410,2714..2801,3794..3882,3981..4046,5709..5823,5912..6165))] [gbkey=CDS]
Sequence

ATGGAAGTTGAAACTCACGCTCTCTCCAGTTTTGATCCCATGAACTCCCATTCTCCTCCT
ATTAACTCCATTTTAGACACGTCGTCTGTTGATAATAATGGCCGGAAATGCCAGTGGTTT
GACTCCGTCGTCGGAGGTGGGATTCCGGTAGATAAGACGACGACGCAAGCGGCTATGACA
GTGCAGAAGGTTTACAGGAGTTATCGCACCCGGCGCATGTTAGCGGACTCTGCTTTGGTT
GCTGAAGAGCTCTGGTGGCAAGGGATAGATTATGCTCGATTGAACCACAGTACAATTTCT
TTCTTCAATTTTCCGACACCGGAGACGGCGGCTTCTCGGTGGAATCGCGTCACTTTAAAT
GCTTCCAAGGTTGGAAAGGGATTATCCAGAGATGGAAAAGCTCAGAAATTAGCTTTTCAG
CACTGGATTGAGGCGATTGACCCACGCCACCGATATGGACATAGCTTGCATATGTACTAT
GAAGAGTGGTGTAAAGCTGATGCTGGTCAGCCCTTCTTCTTTTGGTTGGATCTTGGAGAT
GGCAAAAAGGTTGATCTCAAAGAATGTCCAAGATCTAAGCTTCAGAAACAATGTATTAAG
TATCTTGGACCGCAAGAGAGAGAACATTATGAATATATAGTGGCTGAAGGGAAAATTGTG
CATAAACAAACTGGAAATTATCTTGATACAACCAATGGGTTGCCAGAGGCAAAGTGGATT
TTTGTAATGAGCACCTCAAAAAACCTCTATGCTGGCGAGAAGAAGAGAGGAATATTTCAT
CATTCCAGCTTTCTTGCTGGTGGGGCTACGTTAGCTGCTGGAAGACTAGGGGTAACGGAT
GGGATACTTAAGTCTATTTCAGCATATAGTGGGCATTATCGGCCAAATGATGATAGTCTT
GACAGCCTTTTATCATTTCTCAAGGAAAATGGAGTCAACCTGGATGAGGTTAAGATAAGA
AAGGTAAAAGAAGACGACGAGAGCAATGTAGAGGCACTGTCATCTGAGAGTCACTCTGTG
TCTGAACTTTCAACTATATCTGATTCCCCTCTTCAAGTTGATGATCCGAAGGAAGAGGAA
AAGGACCTTTCCTCGGATTTAATGAGAAGTCCTCGAGTTCAAGAGACAAGTAGCTATAAG
AGAACACTCTCGGGTGGTCTTGAGAGCCCAAGAACAGAGGTGCCAACGACTGCAATACTG
CAAAGGATCAACTCAAAGAAGTCTGCAAAGTCGTATCAGCTGGGTCATCAACTCTCCCTG
GCATGGTCAACTGGTGCTGGTCCAAGAATTGGCTGCATTGCTGACTACCCTGCTGAACTA
AGGCAGCAGGCCTTGGAACTGACTAACCTCTCACCTAGACCCTGTTCTGCATCATCAATT
CCAAGGCCGATTGATGATATTGTATCACCTACTTGTCCTTCACCAGTTCTTTGCAATGGG
GATGTAACACGCACCTGA

Peptide Sequence

PEP ID

XP_016497871.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM3-like isoform X2 [Nicotiana tabacum]
Sequence

MEVETHALSSFDPMNSHSPPINSILDTSSVDNNGRKCQWFDSVVGGGIPVDKTTTQAAMT
VQKVYRSYRTRRMLADSALVAEELWWQGIDYARLNHSTISFFNFPTPETAASRWNRVTLN
ASKVGKGLSRDGKAQKLAFQHWIEAIDPRHRYGHSLHMYYEEWCKADAGQPFFFWLDLGD
GKKVDLKECPRSKLQKQCIKYLGPQEREHYEYIVAEGKIVHKQTGNYLDTTNGLPEAKWI
FVMSTSKNLYAGEKKRGIFHHSSFLAGGATLAAGRLGVTDGILKSISAYSGHYRPNDDSL
DSLLSFLKENGVNLDEVKIRKVKEDDESNVEALSSESHSVSELSTISDSPLQVDDPKEEE
KDLSSDLMRSPRVQETSSYKRTLSGGLESPRTEVPTTAILQRINSKKSAKSYQLGHQLSL
AWSTGAGPRIGCIADYPAELRQQALELTNLSPRPCSASSIPRPIDDIVSPTCPSPVLCNG
DVTRT

Transcript Sequence

Gene sequence data has not been registered.